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| 1 | +==26937== Memcheck, a memory error detector |
| 2 | +==26937== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. |
| 3 | +==26937== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info |
| 4 | +==26937== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info |
| 5 | +==26937== Parent PID: 24649 |
| 6 | +==26937== |
| 7 | +==26937== |
| 8 | +==26937== FILE DESCRIPTORS: 9 open (3 std) at exit. |
| 9 | +==26937== Open file descriptor 12: |
| 10 | +==26937== at 0xF8780ED: pipe (pipe.c:29) |
| 11 | +==26937== by 0x1973307D: ??? |
| 12 | +==26937== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) |
| 13 | +==26937== by 0x10170418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 14 | +==26937== by 0x10109D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 15 | +==26937== by 0x102F9D38: PetscInitialize (pinit.c:924) |
| 16 | +==26937== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) |
| 17 | +==26937== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) |
| 18 | +==26937== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) |
| 19 | +==26937== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) |
| 20 | +==26937== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) |
| 21 | +==26937== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) |
| 22 | +==26937== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) |
| 23 | +==26937== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) |
| 24 | +==26937== |
| 25 | +==26937== Open file descriptor 8: /dev/shm/open_mpi.0000 |
| 26 | +==26937== at 0xF87CA8C: __open_nocancel (open64_nocancel.c:39) |
| 27 | +==26937== by 0xF800BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) |
| 28 | +==26937== by 0xF1B0822: ??? |
| 29 | +==26937== by 0xF1B096F: ??? |
| 30 | +==26937== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 31 | +==26937== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 32 | +==26937== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 33 | +==26937== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) |
| 34 | +==26937== by 0x10170418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 35 | +==26937== by 0x10109D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 36 | +==26937== by 0x102F9D38: PetscInitialize (pinit.c:924) |
| 37 | +==26937== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) |
| 38 | +==26937== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) |
| 39 | +==26937== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) |
| 40 | +==26937== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) |
| 41 | +==26937== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) |
| 42 | +==26937== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) |
| 43 | +==26937== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) |
| 44 | +==26937== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) |
| 45 | +==26937== |
| 46 | +==26937== Open file descriptor 145: |
| 47 | +==26937== <inherited from parent> |
| 48 | +==26937== |
| 49 | +==26937== Open file descriptor 142: |
| 50 | +==26937== <inherited from parent> |
| 51 | +==26937== |
| 52 | +==26937== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt |
| 53 | +==26937== <inherited from parent> |
| 54 | +==26937== |
| 55 | +==26937== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp |
| 56 | +==26937== <inherited from parent> |
| 57 | +==26937== |
| 58 | +==26937== |
| 59 | +==26937== HEAP SUMMARY: |
| 60 | +==26937== in use at exit: 638,058 bytes in 8,478 blocks |
| 61 | +==26937== total heap usage: 1,125,050 allocs, 1,116,572 frees, 1,417,429,386 bytes allocated |
| 62 | +==26937== |
| 63 | +==26937== LEAK SUMMARY: |
| 64 | +==26937== definitely lost: 0 bytes in 0 blocks |
| 65 | +==26937== indirectly lost: 0 bytes in 0 blocks |
| 66 | +==26937== possibly lost: 0 bytes in 0 blocks |
| 67 | +==26937== still reachable: 56 bytes in 3 blocks |
| 68 | +==26937== suppressed: 638,002 bytes in 8,475 blocks |
| 69 | +==26937== Reachable blocks (those to which a pointer was found) are not shown. |
| 70 | +==26937== To see them, rerun with: --leak-check=full --show-leak-kinds=all |
| 71 | +==26937== |
| 72 | +==26937== For lists of detected and suppressed errors, rerun with: -s |
| 73 | +==26937== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37) |
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