Fix bug where any tool was allowed to be run #4133

Job	Run time
build-and-check	3m 1s
test-integration-.agents	50s
test-integration-cli	46s
test-integration-backend	42s
test-integration-npm-app	43s
test-backend	41s
test-integration-packages/agent-runtime	49s
test-integration-common	50s
test-common	41s
test-npm-app	44s
test-cli	53s
test-integration-web	42s
test-.agents	43s
test-web	45s
test-packages/agent-runtime	1m 0s
	13m 50s

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