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Skel

Root3D Skeleton Traits calculates the traits based on skeleton by Olga Symonova (olga.symonova@gmail.com).

Usage

# skel [fileinput] [fileoutput] [scale]
skel /path/to/point/cloud.out /path/to/features.tsv 2.25

Input & Output

Input: point cloud data

0.15
             1904987
354 359 613
355 359 613
356 359 613
357 359 613
347 360 613
348 360 613
...

Output

File Format	Description	Purpose
or.iv
or.wrl	Object Mesh	Quality Control
sk.iv
sk.wrl	Skeleton Mesh	Quality Control
.tsv	Measurements	Analysis

Build & Installation

# Download and compile skel binary
git clone https://github.com/Topp-Roots-Lab/Gia3D.git && cd Gia3D && make

Additional Information

Original guide can be found in compile-cmd; it can be found in early commits such as here: https://github.com/Topp-Roots-Lab/Gia3D/blob/8872645ec126c41b18dffc92020e0931ff95613f/compile-cmd