Allen Institute for Neural Dynamics
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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openscope-community-predictive-processing
openscope-community-predictive-processing PublicThis repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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supervoxel-loss
supervoxel-loss PublicEfficient connectivity-preserving loss function for training neural networks to perform instance segmentation.
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ibl-ephys-alignment-gui
ibl-ephys-alignment-gui PublicForked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
Repositories
- autopilot-capsule-template Public template Forked from AllenNeuralDynamics/aind-capsule-template
A template for capsule repositories with Copilot CLI & CO skills installed
AllenNeuralDynamics/autopilot-capsule-template’s past year of commit activity - AuthorshipExtractor Public
AllenNeuralDynamics/AuthorshipExtractor’s past year of commit activity - aind-torch-utils Public
Generic, queue-based, multi-GPU PyTorch inference pipeline for large volumetric (3D or 5D T,C,Z,Y,X) data.
AllenNeuralDynamics/aind-torch-utils’s past year of commit activity - aind-data-transfer-service Public
FastAPI service to run data compression and transfer jobs on the hpc
AllenNeuralDynamics/aind-data-transfer-service’s past year of commit activity - aind-dft-ephys-analysis Public
shared library for dynamic foraging task (DFT) - neuropixels analysis
AllenNeuralDynamics/aind-dft-ephys-analysis’s past year of commit activity
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