fix(test): add cell_detection parquet files to HETA e2e expected results

[olivermeyer]

Why?
Staging now runs HETA 1.2.0 which produces two additional parquet output files (cell_detection_parquet_polygons.parquet and cell_detection_parquet_centers.parquet) that production does not yet emit. Having a single shared expected-results list made it impossible to assert the correct file set per environment.

How?
Moved SPOT_0_EXPECTED_RESULT_FILES and SPOT_1_EXPECTED_RESULT_FILES from top-level defaults into their respective production and staging match arms so each environment can declare its own expected artifacts. The staging lists include the two new cell detection parquet files; the production lists remain unchanged.

[Copilot]

Pull request overview

Updates the HETA (he-tme) end-to-end test expectations to account for two newly produced parquet artifacts so the existing CLI/GUI e2e assertions on result contents and file sizes remain aligned with current application outputs.

Changes:

• Add cell_detection_parquet_polygons.parquet to the expected result file lists for SPOT_0 and SPOT_1.
• Add cell_detection_parquet_centers.parquet to the expected result file lists for SPOT_0 and SPOT_1.
• Record expected byte sizes (and tolerances) for both new artifacts.

[codecov]

❌ 1 Tests Failed:

Tests completed	Failed	Passed	Skipped
880	1	879	14

View the full list of 1 ❄️ flaky test(s)

tests.aignostics.application.gui_test::test_gui_home_to_application[test-app-test-app-This is the test application with two algorithms]

Flake rate in main: 8.82% (Passed 31 times, Failed 3 times)

Stack Traces | 70s run time

user = <nicegui.testing.user.User object at 0x7f58584ea8b0>
application_id = 'test-app', application_name = 'test-app'
expected_text = 'This is the test application with two algorithms'
silent_logging = None
record_property = <function record_property.<locals>.append_property at 0x7f583f023110>

    @pytest.mark.e2e
    @pytest.mark.flaky(retries=2, delay=5, only_on=[AssertionError])
    @pytest.mark.timeout(timeout=60 * 2)
    @pytest.mark.parametrize(
        ("application_id", "application_name", "expected_text"),
        [
            (
                "he-tme",
                "Atlas H&E-TME",
                "The Atlas H&E TME is an AI application",
            ),
            (
                "test-app",
                "test-app",  # TODO(Helmut): Check in with Ari
                "This is the test application with two algorithms",
            ),
        ],
    )
    async def test_gui_home_to_application(  # noqa: PLR0913, PLR0917
        user: User, application_id: str, application_name: str, expected_text: str, silent_logging: None, record_property
    ) -> None:
        """Test that the user sees the specific application page with expected content."""
        record_property("tested-item-id", "SPEC-APPLICATION-SERVICE, SPEC-GUI-SERVICE")
        await user.open("/")
        await user.should_see(application_name, retries=100)
        user.find(marker=f"SIDEBAR_APPLICATION:{application_id}").click()
>       await user.should_see(expected_text, retries=300)

.../aignostics/application/gui_test.py:80: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <nicegui.testing.user.User object at 0x7f58584ea8b0>
target = 'This is the test application with two algorithms'

    async def should_see(self,
                         target: str | type[T] | None = None,
                         *,
                         kind: type[T] | None = None,
                         marker: str | list[str] | None = None,
                         content: str | list[str] | None = None,
                         retries: int = 3,
                         ) -> None:
        """Assert that the page contains an element fulfilling certain filter rules.
    
        Note that there is no scrolling in the user simulation -- the entire page is always *visible*.
        Due to asynchronous execution, sometimes the expected elements only appear after a short delay.
    
        By default `should_see` makes three attempts to find the element before failing.
        This can be adjusted with the `retries` parameter.
        """
        for _ in range(retries):
            with self._client:
                if self.notify.contains(target) or self._gather_elements(target, kind, marker, content):
                    return
                await asyncio.sleep(0.1)
>       raise AssertionError('expected to see at least one ' + self._build_error_message(target, kind, marker, content))
E       AssertionError: expected to see at least one element with marker=This is the test application with two algorithms or content=This is the test application with two algorithms on the page:
E       q-layout
E        Header [model-value=True, elevated=True, add-scroll-padding=True]
E         Link [href=/, target=_self]
E          Image [src=/assets/logo.png]
E          Tooltip [text=Go to start page]
E         Space
E         Icon [name=construction]
E          Tooltip [text=test-app]
E         Label [text=Test Application]
E         Space
E         DarkMode
E         Button [icon=dark_mode, visible=False]
E         RefreshableContainer
E          Spinner [size=1em, thickness=5.0, flat=True, visible=False]
E          DropdownButton [icon=img:https://s.gravat..., flat=True]
E           Card
E            Row
E             Image [src=https://s.gravatar.c...]
E             Column
E              Label [text=prealpha test (Andre...]
E              Label [text=Admin at pre-alpha-o...]
E              Label [text=Authentication valid...]
E            Separator
E            Row
E             Button [label=Re-authenticate now, icon=switch_account]
E             Space
E             Button [label=Edit Profile, icon=edit]
E         Button [icon=folder_special, flat=True]
E          Tooltip [text=Open data directory...]
E         Button [icon=menu, flat=True]
E          Tooltip [text=Open menu]
E        LeftDrawer [model-value=True, side=left, elevated=True, breakpoint=0]
E         List [bordered=True, separator=True]
E          ItemLabel [text=Applications, header=True]
E          Separator
E          Item [markers=SIDEBAR_APPLICATION:he-tme, clickable=True]
E           ItemSection [avatar=True]
E            Icon [name=biotech]
E             Tooltip [text=he-tme]
E           ItemSection
E            Label [text=Atlas H&E-TME]
E          Item [markers=SIDEBAR_APPLICATION:test-app, clickable=True]
E           ItemSection [avatar=True]
E            Icon [name=construction]
E             Tooltip [text=test-app]
E           ItemSection
E            Label [text=Test Application]
E         List [bordered=True, separator=True]
E          Row
E           ItemLabel [text=Runs, header=True]
E           Input [markers=INPUT_RUNS_FILTER_NOTE_OR_TAGS, for=c47, placeholder=Filter by note or ta..., type=text, rounded=True, outlined=True, dense=True, clearable=True]
E           RunFilterButton [markers=BUTTON_RUNS_FILTER_COMPLETED, name=done_all, size=sm]
E            Tooltip [text=Show completed runs...]
E          Separator
E          RefreshableContainer
E           ScrollArea [id=runs-list-container, content-style=padding-right: 0;]
E            Column
E             Item [markers=SIDEBAR_RUN_ITEM:0:6cf5d072-be55-415f-8749-844502df4da4, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:0, text=he-tme (1.2.0)]
E               Label [text=a second, from 06-08...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:1:72feadb4-f937-4bb0-8e5e-6948af56c832, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:1, text=he-tme (1.2.0)]
E               Label [text=5 seconds, from 06-0...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:2:ed2d8c66-0731-4292-85ba-ba274b9e30b8, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:2, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E             Item [markers=SIDEBAR_RUN_ITEM:3:c9c191ed-8acf-4801-bc13-babaeec68fb0, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:3, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:4:f243af58-0dc4-4fad-81ee-4ab557c17c48, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:4, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:5:19d7837b-d196-4f60-becd-1b0fba904365, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:5, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_item_metadata_1..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:6:24886419-bea5-40bf-9a75-35cd8c706d4f, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:6, text=he-tme (1.2.0)]
E               Label [text=a second, from 06-08...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:7:d8535f7d-5ee6-40cc-bfdc-639d83827dc5, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:7, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_metadata_178091..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:8:0981b2fe-8c0d-407d-81ad-3dab06e1770e, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:8, text=he-tme (1.2.0)]
E               Label [text=5 seconds, from 06-0...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:9:541e88b0-7b80-4de2-b1e4-c522a180cfab, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:9, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E             Item [markers=SIDEBAR_RUN_ITEM:10:d5ee94d2-d124-4e3b-80b7-53292a01c7de, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:10, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:11:f5e3aefe-d52e-4ea7-b2a5-0619d2497777, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:11, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:12:508d96dc-0bae-4309-a9e6-cf666540eb0f, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:12, text=he-tme (1.2.0)]
E               Label [text=a second, from 06-08...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:13:6906487c-878b-4a31-9c61-fb727de5a7c7, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:13, text=he-tme (1.2.0)]
E               Label [text=6 seconds, from 06-0...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:14:c772bfe3-b6dd-49c1-a493-42632cf146af, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:14, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_item_metadata_1..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:15:f43a4fff-54af-41f3-a35c-348265de8522, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:15, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_metadata_178091..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:16:a66d207a-fab0-4325-bb19-79aa358cf1d1, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:16, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E             Item [markers=SIDEBAR_RUN_ITEM:17:3135cc84-3bab-4b64-be47-fb2bfd65a43f, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:17, text=he-tme (1.2.0)]
E               Label [text=a second, from 06-08...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:18:046efa74-469d-4ef9-9bf3-62dfe627808c, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:18, text=he-tme (1.2.0)]
E               Label [text=5 seconds, from 06-0...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:19:46435335-15e1-4e10-9d22-54108ace62eb, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:19, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:20:eadd0f6a-cafc-4b90-b03d-99b801421552, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:20, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:21:56e46c79-3875-414b-98f5-8702c040d005, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:21, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E             Item [markers=SIDEBAR_RUN_ITEM:22:b8377ec8-f6ae-4b97-a627-9461c5aaa87e, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:22, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:23:8dfa88f0-06de-41e9-a077-48ef6b99ff7b, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:23, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:24:870254b6-f286-4d3f-933d-0da84eb3ae69, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:24, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_item_metadata_1..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:25:0a2312bf-170f-4735-803d-ebfd16ac1026, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:25, text=he-tme (1.2.0)]
E               Label [text=a second, from 06-08...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:26:032f9717-a585-44dc-8a3c-9613e01f27a9, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:26, text=he-tme (1.2.0)]
E               Label [text=2 seconds, from 06-0...]
E               Row
E                Chip [text=test_metadata_178091..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:27:d7ba4944-6660-4a54-9985-888620780c35, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:27, text=he-tme (1.2.0)]
E               Label [text=5 seconds, from 06-0...]
E               Row
E                Chip [text=test_json_format_178..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:28:d9032549-d9eb-46e8-bb43-44fe9e53536a, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:28, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E             Item [markers=SIDEBAR_RUN_ITEM:29:f8b3d350-922b-484f-976e-b61ca10b06ce, clickable=True]
E              ItemSection [avatar=True]
E               CircularProgress [max=1, size=xl, show-value=True, track-color=grey-4]
E                Icon [name=cancel]
E                 Tooltip [text=0 of 1 succeeded, st...]
E              ItemSection
E               Label [markers=LABEL_RUN_APPLICATION:29, text=he-tme (1.2.0)]
E               Label [text=a moment, from 06-08...]
E               Row
E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
E             Item [markers=SIDEBAR_RUN_ITEM:30:f2e99907-3db1-4d37-92ba-05d26ffa5b72, clickable=True]
E              ItemSection [avatar=True]
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E               Label [text=2 seconds, from 06-0...]
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E               Label [text=a moment, from 06-06...]
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E               Label [text=2 seconds, from 06-0...]
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E               Label [text=a moment, from 06-06...]
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E               Label [text=a moment, from 06-06...]
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E                Chip [text=test_cli_run_submit_..., model-value=True, clickable=True]
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E        q-page-container
E         q-page
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E           Colors [primary=#1C1242, secondary=#B9B1DF, accent=#111B1E, dark=#1d1d1d1d, dark-page=#12121212, positive=#0CA57B, negative=#D4313C, info=#261C8D, warning=#FFCC00, custom-colors={'success': '#0CA57B...]
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E           Timer
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E              Markdown [content=The Atlas H&E TME Te..., sanitize=True, resource-name=codehilite_821444cf7...]
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E            Row
E             Button [label=Release Notes, icon=change_history]
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E             Icon [name=network_check, size=lg]
E              Tooltip [text=For testing only.]
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E           Stepper [model-value=Select Application V..., keep-alive=True, vertical=True]
E            Step [name=Select Application V..., title=Select Application V..., :done=False]
E             Row
E              Column
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E               Select [model-value={'value': 0, 'label'..., options=[{'value': 0, 'label...]
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E                Tooltip [text=Show changes and inp...]
E             StepperNavigation
E              Button [markers=BUTTON_APPLICATION_VERSION_NEXT, label=Next]
E            Step [name=Find Whole Slide Ima..., title=Find Whole Slide Ima...]
E             Label [text=Select the folder wi...]
E             Label [text=Supported formats: ....]
E             StepperNavigation
E              Button [markers=BUTTON_PYTEST_HOME, label=Home, icon=folder]
E              Button [markers=BUTTON_WSI_SELECT_DATA, label=Data, icon=folder_special]
E               Tooltip [text=Select folder within...]
E              Button [markers=BUTTON_WSI_SELECT_CUSTOM, label=Custom, icon=folder]
E               Tooltip [text=Select custom folder...]
E              Button [markers=BUTTON_WSI_NEXT, label=Next, disable=True]
E              Spinner [size=lg, thickness=5.0, visible=False]
E              Button [label=Back, flat=True]
E            Step [name=Prepare Whole Slide..., title=Prepare Whole Slide...]
E             Markdown [content=The..., sanitize=True, resource-name=codehilite_821444cf7...]
E             AgGrid [markers=GRID_METADATA, options={'theme': 'quartz',..., modules=['AllCommunityModule...]
E             Timer
E             StepperNavigation
E              Button [markers=BUTTON_PYTEST_META, label=Select, icon=folder]
E              Button [markers=BUTTON_METADATA_NEXT, label=Next, disable=True]
E              Button [markers=BUTTON_DELETE_SELECTED, label=Exclude, disable=True]
E               Tooltip [text=Exclude selected sli...]
E              Button [label=Back, flat=True]
E            Step [name=Notes and Tags, title=Notes and Tags]
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E              Textarea [markers=TEXTAREA_NOTE, label=Note (optional), for=c233, placeholder=Enter a note for thi..., type=textarea]
E             InputChips [markers=INPUT_TAGS, label=Tags (optional, pres..., for=c234, new-value-mode=add-unique, use-input=True, use-chips=True, fill-input=True, multiple=True, hide-dropdown-icon=True, clearable=True]
E             StepperNavigation
E              Button [markers=BUTTON_NOTES_AND_TAGS_NEXT, label=Next]
E              Button [label=Back, flat=True]
E            Step [name=Schedule, title=Schedule]
E             Column
E              Label [text=Soft Due Date]
E              Label [text=The platform will tr...]
E              Row
E               Label
E               Date [markers=DATE_DUE_DATE, model-value=2026-06-08 15:33, mask=YYYY-MM-DD HH:mm, :options=(date) => date >= '2...]
E               Time [markers=TIME_DUE_DATE, model-value=2026-06-08 15:33, mask=YYYY-MM-DD HH:mm, format24h=True, now-btn=True]
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E              Label [text=The platform might c...]
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E               Time [markers=TIME_DEADLINE, model-value=2026-06-09 09:33, mask=YYYY-MM-DD HH:mm, format24h=True, now-btn=True]
E             StepperNavigation
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E              Button [label=Back, flat=True]
E            Step [name=Pipeline, title=Pipeline]
E             Label [text=Pipeline configurati...]
E             StepperNavigation
E              Button [markers=BUTTON_PIPELINE_NEXT, label=Next]
E              Button [label=Back, flat=True]
E            Step [name=Submit, title=Submit]
E             RefreshableContainer
E              Column
E               Label [text=Upload and submit yo...]
E               Row
E             Timer
E             StepperNavigation
E              Button [markers=BUTTON_SUBMISSION_UPLOAD, label=Upload and Submit, icon=check]
E               Tooltip [text=Upload selected slid...]
E              Button [label=Back, flat=True]
E        RightDrawer [model-value=True, side=right]
E         Column
E          List
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E            ItemSection [avatar=True]
E             Icon [name=biotech]
E            ItemSection
E             Label [text=Run Applications]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=image]
E            ItemSection
E             Label [text=Download Datasets]
E          Space
E          List
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=visibility]
E            ItemSection
E             Label [text=QuPath Extension]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=difference]
E            ItemSection
E             Label [text=Marimo Extension]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=cloud]
E            ItemSection
E             Label [text=Manage Cloud Bucket]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             RefreshableContainer
E              Icon [name=settings]
E            ItemSection
E             Label [text=Info and Settings]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=domain]
E            ItemSection
E             Link [markers=LINK_PLATFORM, text=Go to Console, href=https://platform.aig..., target=_blank]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=local_library]
E            ItemSection
E             Link [markers=LINK_DOCUMENTATION, text=Read The Docs, href=https://aignostics.r..., target=_blank]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=help]
E            ItemSection
E             Link [markers=LINK_DOCUMENTATION, text=Get Support, href=https://platform.aig..., target=_blank]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=check_circle]
E            ItemSection
E             Link [markers=LINK_DOCUMENTATION, text=Check Platform Statu..., href=https://status.platf..., target=_blank]
E           Item [clickable=True]
E            ItemSection [avatar=True]
E             Icon [name=handshake]
E            ItemSection
E             Link [markers=LINK_ATTRIBUTIONS, text=Attributions, href=https://aignostics.r..., target=_blank]
E        Footer [model-value=True]
E         Row
E          RefreshableContainer
E           Link [href=/system, target=_self]
E            Row
E             Tooltip [text=Check Launchpad Stat...]
E             Icon [name=check_circle]
E             Label [text=Launchpad is healthy]
E          Row
E           iframe [id=betterstack, src=https://status.platf..., width=250, height=30, frameborder=0, scrolling=no]
E           Tooltip [text=Check Platform Statu...]
E          Space
E          Row
E           Html [content=#x1F52C<a style="color: bl..., tag=div]
E           Tooltip [text=Visit GitHub reposit...]
E        Dialog
E         Card
E          Label [text=Release notes of Tes...]
E          ScrollArea
E           Label [text=Version 1.0.0]
E           Markdown [content=Brought inputs into..., sanitize=True, resource-name=codehilite_821444cf7...]
E           Label [text=Version 0.0.6]
E           Markdown [content=test-app changes tha..., sanitize=True, resource-name=codehilite_821444cf7...]
E          Row
E           Column
E            Button [label=Close]
E        Dialog
E         Card
E          RefreshableContainer
E           ScrollArea
E            Label [text=Latest changes in v1...]
E            Markdown [content=Brought inputs into..., sanitize=True, resource-name=codehilite_821444cf7...]
E            Label [text=Expected Input Artif...]
E            Expansion [label=whole_slide_image, icon=image]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Label [text=Generated output art...]
E            Expansion [label=tissue_segmentation:..., icon=place]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: applicati...]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Expansion [label=tissue_qc:csv_class_..., icon=table_rows]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: text/csv]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Expansion [label=tissue_segmentation:..., icon=image]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: image/tif...]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Expansion [label=tissue_qc:geojson_po..., icon=place]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: applicati...]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Expansion [label=tissue_qc:segmentati..., icon=image]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: image/tif...]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E            Expansion [label=tissue_segmentation:..., icon=table_rows]
E             Label [text=Scope: OutputArtifac...]
E             Label [text=Mime Type: text/csv]
E             Label [text=Metadata]
E             JsonEditor [properties={'content': {'json':...]
E          Row
E           Column
E            Button [label=Close]

..../test-3-14-3/lib/python3.14.../nicegui/testing/user.py:142: AssertionError

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[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

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[Copilot]

Pull request overview

Copilot reviewed 1 out of 1 changed files in this pull request and generated 4 comments.

[aig-hannes]

lgtm