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ctrueden merged 1 commit into from
Dec 10, 2024
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Update frangi.md #352

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2 changes: 1 addition & 1 deletion _pages/plugins/frangi.md
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Expand Up @@ -9,7 +9,7 @@ categories: [Uncategorized]

_Frangi vesselness_ is an algorithm for detection of tube-like structures (such as in imagery of filamentous structures (blood vessels, neurites, etc.). It applies to both 2D and 3D images and was first described by Frangi et al 1998.[^1] ([PDF](https://link.springer.com/content/pdf/10.1007%252FBFb0056195.pdf)). In many cases, this method is known to be a better alternative to single-scale [Tubeness](/plugins/tubeness) filtering (at least for isotropic images), but it is slower. There are two ImageJ implementations of the algorithm:

- A legacy plugin (In Fiji registered under {% include bc path='Plugins|Process|Frangi Vesselness' %} ([source code](https://github.com/fiji/Feature_Detection)). This is a deprecated implementaton with expected inaccuracies.
- A legacy plugin (In Fiji registered under {% include bc path='Process|Filters|Frangi Vesselness' %} ([source code](https://github.com/fiji/Feature_Detection)). This is a deprecated implementaton with expected inaccuracies.

- An [ImageJ Op](/libs/imagej-ops/index) (In Fiji registed under {% include bc path='Plugins|Process|Frangi Vesselness' %}). This version superseeds previous implementations and has been validated/benchmarked againgst other implementations (namely ITK and MATLAB) ([details](https://forum.image.sc/t/frangi-vesselness-filter-feedback/6747)). It requires 3 inputs:

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