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Merged
Grufoony merged 4 commits into from
Apr 9, 2026
Merged

Update dependencies #434

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d2b8c7a
Update `pybind11` to version 3.0.3
Grufoony Apr 9, 2026
5117e7f
Update `csv-parser` to version 3.1.0
Grufoony Apr 9, 2026
599c4a6
Update `simdjson` to version 4.6.1
Grufoony Apr 9, 2026
0257d97
Update google benchmark to version 1.9.5
Grufoony Apr 9, 2026
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11 changes: 5 additions & 6 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -104,7 +104,7 @@ include(FetchContent)
FetchContent_Declare(
csv-parser
GIT_REPOSITORY https://github.com/vincentlaucsb/csv-parser
GIT_TAG 2.5.1)
GIT_TAG 3.1.0)
FetchContent_GetProperties(csv-parser)
if(NOT csv-parser_POPULATED)
FetchContent_MakeAvailable(csv-parser)
Expand Down Expand Up @@ -136,7 +136,7 @@ endif()
FetchContent_Declare(
simdjson
GIT_REPOSITORY https://github.com/simdjson/simdjson
GIT_TAG v4.3.0)
GIT_TAG v4.6.1)
FetchContent_GetProperties(simdjson)
if(NOT simdjson_POPULATED)
FetchContent_MakeAvailable(simdjson)
Expand Down Expand Up @@ -168,10 +168,9 @@ target_include_directories(
dsf PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/src>
$<INSTALL_INTERFACE:include>)

target_include_directories(dsf PRIVATE ${csv-parser_SOURCE_DIR}/single_include)

# Link other libraries
target_link_libraries(dsf PUBLIC TBB::tbb SQLiteCpp PRIVATE simdjson::simdjson spdlog::spdlog)
target_link_libraries(dsf PUBLIC TBB::tbb SQLiteCpp
PRIVATE $<BUILD_INTERFACE:simdjson::simdjson> spdlog::spdlog $<BUILD_INTERFACE:csv>)

# Install dsf library
install(
Expand Down Expand Up @@ -204,7 +203,7 @@ if(BUILD_PYTHON_BINDINGS)
FetchContent_Declare(
pybind11
GIT_REPOSITORY https://github.com/pybind/pybind11.git
GIT_TAG v3.0.2)
GIT_TAG v3.0.3)
FetchContent_GetProperties(pybind11)
if(NOT pybind11_POPULATED)
FetchContent_MakeAvailable(pybind11)
Expand Down
4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -6,8 +6,8 @@
[![Standard](https://img.shields.io/badge/C%2B%2B-20/23-blue.svg)](https://en.wikipedia.org/wiki/C%2B%2B#Standardization)
[![TBB](https://img.shields.io/badge/TBB-2022.3.0-blue.svg)](https://github.com/oneapi-src/oneTBB)
[![SPDLOG](https://img.shields.io/badge/spdlog-1.17.0-blue.svg)](https://github.com/gabime/spdlog)
[![CSV](https://img.shields.io/badge/csv_parser-2.5.0-blue.svg)](https://github.com/vincentlaucsb/csv-parser)
[![JSON](https://img.shields.io/badge/simdjson-4.3.0-blue.svg)](https://github.com/simdjson/simdjson)
[![CSV](https://img.shields.io/badge/csv_parser-3.1.0-blue.svg)](https://github.com/vincentlaucsb/csv-parser)
[![JSON](https://img.shields.io/badge/simdjson-4.6.1-blue.svg)](https://github.com/simdjson/simdjson)
[![SQLite](https://img.shields.io/badge/SQLiteCpp-3.3.3-blue.svg)](https://github.com/SRombauts/SQLiteCpp)
[![codecov](https://codecov.io/gh/physycom/DynamicalSystemFramework/graph/badge.svg?token=JV53J6IUJ3)](https://codecov.io/gh/physycom/DynamicalSystemFramework)

Expand Down
4 changes: 2 additions & 2 deletions benchmark/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ set(BENCHMARK_ENABLE_TESTING OFF)
FetchContent_Declare(
benchmark
GIT_REPOSITORY https://github.com/google/benchmark
GIT_TAG v1.9.4
GIT_TAG v1.9.5
)
FetchContent_MakeAvailable(benchmark)

Expand All @@ -37,6 +37,6 @@ foreach(SOURCE ${SOURCES})
get_filename_component(EXE_NAME ${SOURCE} NAME_WE)
add_executable(${EXE_NAME}.out ${SOURCE})
target_compile_definitions(${EXE_NAME}.out PRIVATE SPDLOG_USE_STD_FORMAT)
target_link_libraries(${EXE_NAME}.out PRIVATE dsf TBB::tbb simdjson::simdjson spdlog::spdlog benchmark::benchmark)
target_link_libraries(${EXE_NAME}.out PRIVATE dsf TBB::tbb $<BUILD_INTERFACE:simdjson::simdjson> spdlog::spdlog benchmark::benchmark)
target_include_directories(${EXE_NAME}.out PRIVATE $<INSTALL_INTERFACE:include>)
endforeach()
10 changes: 5 additions & 5 deletions profiling/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ include(FetchContent)
FetchContent_Declare(
csv-parser
GIT_REPOSITORY https://github.com/vincentlaucsb/csv-parser
GIT_TAG 2.4.1)
GIT_TAG 3.1.0)
FetchContent_GetProperties(csv-parser)
if(NOT csv-parser_POPULATED)
FetchContent_MakeAvailable(csv-parser)
Expand All @@ -33,13 +33,13 @@ file(GLOB SOURCES "../src/dsf/base/*.cpp" "../src/dsf/mobility/*.cpp"

# Define the executable
add_executable(prof.out main.cpp ${SOURCES})
target_include_directories(prof.out PRIVATE ../src/ ${csv-parser_SOURCE_DIR}/single_include)
target_include_directories(prof.out PRIVATE ../src/)
target_link_libraries(prof.out PRIVATE TBB::tbb fmt::fmt spdlog::spdlog
simdjson::simdjson)
$<BUILD_INTERFACE:simdjson::simdjson> $<BUILD_INTERFACE:csv>)
target_compile_options(prof.out PRIVATE -pg)
target_link_options(prof.out PRIVATE -pg)
add_executable(mem.out main.cpp ${SOURCES})
target_include_directories(mem.out PRIVATE ../src/ ${csv-parser_SOURCE_DIR}/single_include)
target_include_directories(mem.out PRIVATE ../src/)
target_link_libraries(mem.out PRIVATE TBB::tbb fmt::fmt spdlog::spdlog
simdjson::simdjson)
$<BUILD_INTERFACE:simdjson::simdjson> $<BUILD_INTERFACE:csv>)
add_executable(parse_massif.out parse_massif.cpp)
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