Simulate ARGs and genomic sequence data using population genetic models
-
Updated
Feb 27, 2026 - Python
#
tskit
Here are 9 public repositories matching this topic...
Genotype likelihood simulator for VCF/BCF files
-
Updated
May 7, 2025 - C++
ARG inference and analysis utilities for pandemic-scale SARS-CoV-2 data
-
Updated
Jan 27, 2026 - Python
Forward time simulation, rust, and tree sequences.
-
Updated
Feb 3, 2025 - Rust
Gzip-like compression for tskit tree sequences
-
Updated
Feb 27, 2026 - Python
Simulating and estimating the effect of gene transfer on bacterial pangenomes.
-
Updated
Dec 12, 2025 - Jupyter Notebook
Improve this page
Add a description, image, and links to the tskit topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the tskit topic, visit your repo's landing page and select "manage topics."